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Browsing Tag

Microarrays

13 posts
SScience
MultiModalGraphics: an R package for graphical integration of multi-omics datasets | BMC Bioinformatics
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MultiModalGraphics: an R package for graphical integration of multi-omics datasets | BMC Bioinformatics

  • October 21, 2025
MultiModalGraphics is an R/Bioconductor package that leverages object-oriented S4 classes to visualize multimodal biological data with embedded statistical…
GGenetics
Genetic variation and genome-enabled selection of white lupin for key seed quality traits | BMC Genomics
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Genetic variation and genome-enabled selection of white lupin for key seed quality traits | BMC Genomics

  • October 16, 2025
Foyer CH, Lam H-M, Nguyen HT, Siddique KHM, Varshney RK, Colmer TD, et al. Neglecting legumes has compromised…
GGenetics
SAGPEK: fast and flexible approach to identify genotypes of Sanger sequencing data | BMC Bioinformatics
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SAGPEK: fast and flexible approach to identify genotypes of Sanger sequencing data | BMC Bioinformatics

  • October 14, 2025
Software architecture SAGPEK mainly processes Sanger sequencing results of two kinds of samples: diploids such as humans and…
TTechnology
The genetic influence of sex on gene expression for blood in pigs | BMC Genomics
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The genetic influence of sex on gene expression for blood in pigs | BMC Genomics

  • October 9, 2025
Data summary We collected 386 blood samples with matched genotype and gene expression data from the PigGTEx project…
GGenetics
Genomic predictions for growth and feed efficiency traits in a duck breeding population | BMC Genomics
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Genomic predictions for growth and feed efficiency traits in a duck breeding population | BMC Genomics

  • October 8, 2025
Animal population and phenotype data This study used a breeding population of Zhongxin white duck (a commercial breed…
HHealth
Comparative genomic analysis of Mycoplasma pneumoniae isolated in the United Kingdom, between 2016 and 2024 | BMC Genomics
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Comparative genomic analysis of Mycoplasma pneumoniae isolated in the United Kingdom, between 2016 and 2024 | BMC Genomics

  • October 8, 2025
The present work was undertaken to use WGS to detect MRMP, p1 type, MLST, as well as to…
SScience
Lineage-specific expansions of the Dicer gene family in tardigrades | BMC Genomics
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Lineage-specific expansions of the Dicer gene family in tardigrades | BMC Genomics

  • October 7, 2025
Bernstein E, Caudy AA, Hammond SM, Hannon GJ. Role for a bidentate ribonuclease in the initiation step of…
GGenetics
Exploring the genetic basis of heterosis in eucalypt growth based on transcriptome analysis | BMC Genomics
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Exploring the genetic basis of heterosis in eucalypt growth based on transcriptome analysis | BMC Genomics

  • October 3, 2025
Preparation of preliminary data In all samples, the proportion of clean reads was higher than 99.5% (Table S2),…
SScience
Chromosome-level genome assembly for Sichuan taimen (Hucho bleekeri) reveals the extraordinary tandem repeat proportions and its persistent population shrinkage | BMC Genomics
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Chromosome-level genome assembly for Sichuan taimen (Hucho bleekeri) reveals the extraordinary tandem repeat proportions and its persistent population shrinkage | BMC Genomics

  • September 26, 2025
Wang K, Zhang SH, Wang DQ, Wu JM, Wang CY, Wei QW. Conservation genetics assessment and phylogenetic relationships…
SScience
Differential cold stress intensities drive unique morphological and transcriptomic changes in Zea mays root hairs | BMC Genomics
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Differential cold stress intensities drive unique morphological and transcriptomic changes in Zea mays root hairs | BMC Genomics

  • September 22, 2025
Kennett DJ, Prufer KM, Culleton BJ, George RJ, Robinson M, et al. Early isotopic evidence for maize as…
GGenetics
Investigating the role of transposable elements in shaping abdominal fat and egg production phenotypic traits in geese | BMC Genomics
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Investigating the role of transposable elements in shaping abdominal fat and egg production phenotypic traits in geese | BMC Genomics

  • September 3, 2025
Shi X, Wang J, Zeng F, Qiu X. Mitochondrial DNA cleavage patterns distinguish independent origin of Chinese domestic…
GGenetics
Transcriptome dynamics and allele-specific regulation underlie wheat heterosis at the anthesis and grain-filling stages | BMC Genomics
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Transcriptome dynamics and allele-specific regulation underlie wheat heterosis at the anthesis and grain-filling stages | BMC Genomics

  • September 3, 2025
Phenotypic evaluation of hybrid and parental lines Phenotypic assessments revealed enhanced hybrid vigor in hybrid BC98, characterized by…
Ireland
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