{"id":290787,"date":"2025-10-10T02:15:11","date_gmt":"2025-10-10T02:15:11","guid":{"rendered":"https:\/\/www.europesays.com\/us\/290787\/"},"modified":"2025-10-10T02:15:11","modified_gmt":"2025-10-10T02:15:11","slug":"genetic-study-shines-light-on-torontos-ancient-subway-deer","status":"publish","type":"post","link":"https:\/\/www.europesays.com\/us\/290787\/","title":{"rendered":"Genetic study shines light on Toronto\u2019s ancient \u2018subway deer\u2019"},"content":{"rendered":"<p><a style=\"display:block\" href=\"https:\/\/www.theglobeandmail.com\/resizer\/v2\/WDRFIHKPBBAJLB7LCK74KGUF3E.JPG?auth=f3068c80b9b9bd50f0c66b0821aba1fc80ef53c7ba89f886a0ea2df47dd95973&amp;width=600&amp;height=400&amp;quality=80&amp;smart=true\" aria-haspopup=\"true\" data-photo-viewer-index=\"0\" target=\"_blank\" rel=\"noopener\">Open this photo in gallery:<\/a><\/p>\n<p class=\"figcap-text\">Collections technician and researcher Oliver Haddrath holds a partial skull and antlers from a prehistoric deer specimen at the Royal Ontario Museum in Toronto on Thursday.Photography by Sammy Kogan\/The Globe and Mail<\/p>\n<p class=\"c-article-body__text text-pr-5\">For visitors wandering among mastodon skeletons and other impressive remains from the Pleistocene epoch at <a href=\"https:\/\/www.theglobeandmail.com\/topics\/toronto\/\" target=\"_blank\" rel=\"noreferrer noopener\" title=\"https:\/\/www.theglobeandmail.com\/topics\/toronto\/\">Toronto\u2019s<\/a> Royal Ontario Museum, a non-descript piece of cranium with broken stubs of antlers may not be the most arresting sight.<\/p>\n<p class=\"c-article-body__text text-pr-5\">Yet the bony fragment inside the glass case is a tantalizing clue to the vanished world that once existed where the city stands today \u2013 a nascent wilderness that emerged from the frozen mantle of the ice age more than 11,000 years ago.<\/p>\n<p class=\"c-article-body__text text-pr-5\">Now, for the first time, scientists have a genetic profile of the fossil, which is called Torontoceros after its hometown, but also goes by its urban transit handle: \u201cthe subway deer.\u201d<\/p>\n<p class=\"c-article-body__text text-pr-5\">The results confirm that Torontoceros was indeed a deer \u2013 but one whose appearance and traits must have diverged substantially from those that frequent the ravines and backyards of Toronto today. <\/p>\n<p class=\"c-article-body__text text-pr-5\">In that contrast, researchers say, lies the mark of a<b> <\/b>world that was in rapid transition.<\/p>\n<p class=\"c-article-body__text text-pr-5\">\u201cThis animal would have seen a landscape completely different than the one we know,\u201d said Oliver Haddrath, a collections technician at the ROM who specializes in the retrieval and analysis of DNA from the museum\u2019s specimens.<\/p>\n<p><a style=\"display:block\" href=\"https:\/\/www.theglobeandmail.com\/resizer\/v2\/XY3BDZ5OCJC2DKBNTKYBXJEWKI.JPG?auth=fcad0b86b75fb4e5ab2f9835e6d347caec90b53cbde0bd50e1ca0b82920cd24c&amp;width=600&amp;height=400&amp;quality=80&amp;smart=true\" aria-haspopup=\"true\" data-photo-viewer-index=\"1\" target=\"_blank\" rel=\"noopener\">Open this photo in gallery:<\/a><\/p>\n<p class=\"figcap-text\">Mr. Haddrath points to the area where DNA was sampled from the partial skull and antlers. The fossil has been named the Torontoceros after its hometown.<\/p>\n<p class=\"c-article-body__text text-pr-5\">The work is <a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2025.09.15.676284v1\" target=\"_blank\" rel=\"noreferrer noopener\" title=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2025.09.15.676284v1\">documented in a study<\/a> that was recently accepted for publication in the journal Biology Letters.<\/p>\n<p class=\"c-article-body__text text-pr-5\">It also adds a new and fascinating chapter to the story of the subway deer, so called because the only known specimen was discovered in 1976 by an employee of the Toronto Transit Commission when work crews were excavating in the city\u2019s west end as part of a subway line extension.<\/p>\n<p class=\"c-article-body__text text-pr-5\">When the specimen was donated to the ROM for examination, experts at the time were challenged to place it in the family tree of known antlered herbivores. <\/p>\n<p class=\"c-article-body__text text-pr-5\">On one hand, the part of the skull that was present is consistent with a deer. But the heavy antlers, which spread horizontally from their point of attachment, are closer in appearance to those of a caribou.<\/p>\n<p class=\"c-article-body__text text-pr-5\">An <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/0033589482900692\" target=\"_self\" rel=\"noopener\" title=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/0033589482900692\">initial study<\/a>, published in 1982, called it a deer, but others have since argued that it is more likely to be a caribou relative. And with no other specimens, that seemed to be where the matter was likely to stay.<\/p>\n<p class=\"c-article-body__text mv-16 l-inset text-pb-8\" data-sophi-feature=\"interstitial\"><a href=\"https:\/\/www.theglobeandmail.com\/opinion\/article-canada-cultural-sector\/\" target=\"_blank\" rel=\"noopener\">Opinion: After 20 years working in Canada\u2019s cultural sector, I can finally speak out without fear<\/a><\/p>\n<p class=\"c-article-body__text text-pr-5\">What has changed is the growing power of genetic tools to extract new information from such rare finds.<\/p>\n<p class=\"c-article-body__text text-pr-5\">The current study originated when a team from Trent University in Peterborough, Ont., approached the ROM to see about analyzing DNA from various deer, elk, moose and caribou specimens in the museum\u2019s collection.<\/p>\n<p class=\"c-article-body__text text-pr-5\">The goal was to glean information about how the genetic diversity within these species changed in historic times in response to environmental pressures and what that might portend for their present-day counterparts.<\/p>\n<p class=\"c-article-body__text text-pr-5\">\u201cWe wanted to build this temporal data set and compare it to modern samples,\u201d said Aaron Shafer, an associate professor of wildlife and applied genomics at Trent. <\/p>\n<p class=\"c-article-body__text text-pr-5\">What Dr. Shafer and his colleagues did not expect was Torontoceros. Once museum staff told them about it, they were game to add it to their study. The only question was whether any DNA could be recovered from the ancient antlers. <\/p>\n<p class=\"c-article-body__text text-pr-5\">\u201cIt\u2019s actually the oldest thing we\u2019ve tried,\u201d Mr. Haddrath said.<\/p>\n<p class=\"c-article-body__text text-pr-5\">Even older<b> <\/b>DNA can be recovered when specimens are found buried in Arctic permafrost and genetic material has lain frozen and inert for tens of thousands of years.<\/p>\n<p class=\"c-article-body__text mv-16 l-inset text-pb-8\" data-sophi-feature=\"interstitial\"><a href=\"https:\/\/www.theglobeandmail.com\/canada\/article-alberta-dinosaur-mosasaur-fossil\/\" target=\"_blank\" rel=\"noopener\">Is this fossil a forgery? Answering that has polarized the paleontology world<\/a><\/p>\n<p class=\"c-article-body__text text-pr-5\">In temperate places such as Toronto, where the soil is repeatedly subjected to an annual freeze-thaw cycle, it\u2019s a different story.<\/p>\n<p class=\"c-article-body__text text-pr-5\">\u201cDepending on how close it is to the surface, that can really take the stuffing out of DNA,\u201d Mr. Haddrath said.<\/p>\n<p class=\"c-article-body__text text-pr-5\">Incredibly, the attempt worked. Mr. Haddrath and Camille Kessler, a PhD student at Trent, managed to find DNA that had persisted in the antlers.<\/p>\n<p class=\"c-article-body__text text-pr-5\">Dr. Shafer realized the team now had a chance to settle the question of the creature\u2019s identity once and for all.<\/p>\n<p class=\"c-article-body__text text-pr-5\">\u201cIt became very clear early on it wasn\u2019t caribou,\u201d he said.<\/p>\n<p class=\"c-article-body__text text-pr-5\">Instead, the DNA suggested the original paper was correct: Torontoceros was a deer. They could also add to this picture because the DNA suggested it was related to mule deer and white-tailed deer, but had diverged before those two modern species split from each other.<\/p>\n<p class=\"c-article-body__text mv-16 l-inset text-pb-8\" data-sophi-feature=\"interstitial\"><a href=\"https:\/\/www.theglobeandmail.com\/arts\/art-and-architecture\/article-what-will-the-rom-do-with-its-paul-kanes\/\" target=\"_blank\" rel=\"noopener\">Opinion: What will the ROM do with its Paul Kanes?<\/a><\/p>\n<p class=\"c-article-body__text text-pr-5\">The physical resemblance to caribou makes sense in the context of the environment the species lived in. At that time, the site of present-day Toronto was an open boreal terrain, not the thickly wooded landscape it would later become. And when trees are not so dense, large, spreading antlers are not an impediment.<\/p>\n<p class=\"c-article-body__text text-pr-5\">Hendrik Poinar, an evolutionary geneticist at McMaster University in Hamilton who was not involved with the study, said Dr. Shafer and his colleagues make a good case for the \u201crapid recent diversification\u201d leading to a deer species like Torontoceros that frequented open, grassy areas. However, he added that mastodon and beaver fossils from the same time period suggest there were also wetlands throughout the region. <\/p>\n<p class=\"c-article-body__text text-pr-5\">As for Torontoceros, and why it went extinct, \u201cthe question is, what was the population size,\u201d Dr. Poinar said. This is information that could emerge<b> <\/b>from further studies of the ROM specimen if the entire genome can be sequenced to reveal more about the species\u2019s diversity.<\/p>\n","protected":false},"excerpt":{"rendered":"Open this photo in gallery: Collections technician and researcher Oliver Haddrath holds a partial skull and antlers from&hellip;\n","protected":false},"author":3,"featured_media":290788,"comment_status":"","ping_status":"","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[26],"tags":[815,159,67,132,68],"class_list":{"0":"post-290787","1":"post","2":"type-post","3":"status-publish","4":"format-standard","5":"has-post-thumbnail","7":"category-genetics","8":"tag-genetics","9":"tag-science","10":"tag-united-states","11":"tag-unitedstates","12":"tag-us"},"share_on_mastodon":{"url":"https:\/\/pubeurope.com\/@us\/115347464428974488","error":""},"_links":{"self":[{"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/posts\/290787","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/comments?post=290787"}],"version-history":[{"count":0,"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/posts\/290787\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/media\/290788"}],"wp:attachment":[{"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/media?parent=290787"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/categories?post=290787"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.europesays.com\/us\/wp-json\/wp\/v2\/tags?post=290787"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}